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PROJECT MANAGER-Automated Synthesis Facility

Scripps Research


Job Location:

San Diego, CA - USA

Yearly Salary: USD 77200 - 96500
Posted: 23 September 2026 (11 hours ago)
Application Deadline: 21 December 2026
Vacancies: 1 Vacancy

Job Summary

ABOUT US:

Scripps Research is a nonprofit biomedical institute ranked as one of the most influential in the world for its impact on innovation. We celebrated our 100-year legacy in 2024. This significant milestone marks a century of seminal discoveries in immunology infectious diseases (such as COVID-19 flu HIV) neuroscience heart disease cancer and more. Located in La Jolla California the institute houses six research departments multiple Nobel laureates a top-ranked graduate school and a leading postdoctoral training program. Scripps Research encompasses two elite and highly innovative institutes the Calibr-Skaggs Institute for Innovative Medicines and Scripps Research Translational Institute which merge foundational studies in biology chemistry and computer science with translational science to produce pioneering drugs and advances in digital and precision medicine. Together we cultivate new scientific leaders and expand the frontiers of knowledge to deliver medical breakthroughs impacting human health around the globe. If you have a passion for making a difference this could be your opportunity to join our transformative team.

POSITION TITLE:Project Manager

POSITION SUMMARY:

The Automated Synthesis Facility (ASF) at Scripps Research hosts the Chemistry Node of the U.S. National Science Foundation Programmable Cloud Laboratory (PCL) Test Bed a four-year NSF Cooperative Agreement. The Node is turning ASF from a supervised shared-use facility into a remotely accessible closed-loop AI-driven chemistry platform: instruments exposed through open standardized interfaces experiments planned and refined by machine-learning models and results captured against FAIR-compliant metadata schemas. The work spans three institutions: Scripps Research UCLA and Sunthetics Inc. with several institutional and industrial partners.

We are looking for a full-time Project Manager to serve as the Nodes dedicated project management professional. Working with the Principal Investigator/Node Director the Project Manager assists in managing the budget schedule and scope of the award; drives the Node against NSFs fixed implementation gates; leads reporting to NSF; and coordinates the Nodes role in Test Bed-wide governance standards development and user recruitment. The position is named Node-level Key Personnel under the awards Cooperative Agreement Programmatic Terms and Conditions and sits on the Node Management Team. The role is a fixture of both operations: approximately 90% of effort supports the NSF award with the balance supporting day-to-day administration of the Automated Synthesis Facility.

DUTIES & RESPONSIBILITES:

  • Assist the Node Director in managing the budget schedule and scope of the project including expenditures against the approved budget subaward invoicing and deliverables (UCLA; Sunthetics Inc.) and coordination with the Scripps Office of Sponsored Programs and financial teams.
  • Maintain the Strategic Implementation Plan and Project Execution Plan (PEP) as living documents and keep the Instrument Inventory Table current in a form satisfying 2 CFR 200.313 equipment use requirements.
  • Drive execution against the PCL Implementation Timeline Alpha (12 months) Beta (18 months) Robust User Service (24 months) and Post-Award Continued Operation (48 months) maintaining the Node risk register and surfacing schedule risk early for re-planning with the Node Director.
  • Lead reporting to NSF: quarterly project reports (quarterly in year one thereafter as requested by the cognizant Program Officer) plus annual and final reports via covering timeline progress cross-node standards workshop outcomes and user onboarding research security and safety and data and AI operations.
  • Provide project management support to the Node Executive Committee and the three Technical Integration Working Groups: set agendas coordinate the biweekly integration and Science Driver meetings and the monthly all-hands and track decisions and action items to closure.
  • Coordinate instrumentation procurement installation and vendor engineering engagements with the Node Director vendor project teams ASF staff and institutional Facilities and Environmental Health & Safety.
  • Coordinate cross-node and NSF-facing engagement: Test Bed working groups on protocols instrument validation metadata standards and AI model practices; site and reverse-site reviews; and the annual in-person PCL PI meeting including logistics for the meeting the Node hosts.
  • Facilitate communication across a distributed technical team ASF staff academic co-Investigators industrial AI/ML engineers and instrument vendors and between the Node its users and the cognizant NSF Program Officer.
  • Coordinate Recruitment and On-Boarding Workshops and the user-access pipeline including solicitation the feasibility and alignment review with the User Access Committee and tracking of safety export-control and responsible-AI onboarding requirements.
  • Track and report Node metrics operational robustness scientific impact and structured user-satisfaction surveys maintain the response strategy for user requests and run the quarterly continuous-improvement cycle.
  • Support compliance and administrative requirements of the Cooperative Agreement including Key Personnel prior-approval notifications participant-support cost handling Build America Buy America and CHIPS and Science Act 10636 provisions BayhDole and knowledge-sharing agreements and NSF acknowledgement and brand standards.
  • Maintain project documentation and version-controlled records and keep current the Nodes public-facing information on capabilities onboarding reproducibility practices and training materials.
  • ASF facility administration (approximately 10% of effort). Support day-to-day operation of the Automated Synthesis Facility alongside the Node: user billing and recharge through Idea Elan Infinity purchase-order reconciliation and laboratory ordering travel coordination for the ASF/Node Director and correspondence with ASF external partners and service clients.

REQUIREMENTS:

  • Bachelors degree in chemistry Biology Engineering Computer Science Information Systems or related field.
  • Project Management Professional (PMP) certification or equivalent qualification as required by the awards Cooperative Agreement Programmatic Terms and Conditions.
  • Minimum of four years experience in project management and/or leadership coordinating scientists and engineers to develop technical solutions to scientific problems.
  • Demonstrated experience managing budget schedule and scope on a multi-institutional project tracking deliverables progress and metrics against a defined roadmap and work plan.
  • Demonstrated experience working with a diverse set of colleagues including chemists engineers and data scientists with a variety of backgrounds.
  • Strategic and analytical thinking.
  • Strong oral and written communications skills coupled with effective interpersonal and collaboration skills.

PREFERED SKILLSTET:

  • An advanced degree (Masters or Ph.D.) in a scientific or engineering domain.
  • Experience working with federally-funded research particularly NSF cooperative agreements or center- and facility-scale awards including reporting subaward administration and prior-approval processes.
  • Familiarity with synthetic or analytical chemistry high-throughput experimentation laboratory automation or shared research-instrumentation facilities.
  • Working familiarity with instrument APIs FAIR data and metadata standards and AI/ML-assisted experimentation.
  • Experience supporting research security export control or laboratory safety programs.
  • Experience organizing workshops training programs or user-facility onboarding.
  • Experience mentoring others.
  • Proactiveness to identify potential issues and develop preemptive solutions.
  • Experience with core-facility recharge and billing platforms (e.g. Idea Elan Infinity) and with institutional purchasing purchase-order reconciliation and travel reimbursement workflows.

LOCATION: La Jolla California. This position is on-site at the Scripps Research California campus and requires regular in-person presence in the Automated Synthesis Facility. Periodic travel is required for partner-site engagement NSF-organized meetings and workshops and the annual in-person PCL PI meeting.

PHYSICAL REQUIREMENTS: This position works in an office environment with regular presence in an active laboratory environment. Further details of the physical requirements of established essential functions for this position will be addressed/discussed during the interview process.

COMPENSATION: The expected hiring range for this position is $77200 to $96500 per year commensurate with experience. Consideration will be given to experience that exceeds the listed requirements.

COMPREHENSIVE BENEFITS INCLUDE:

  • Employer Contributed Retirement Plan Depending on eligibility employees receive an employer contributed retirement plan (no employee contribution required) and the option to contribute to a 403(b) (which is similar to a 401(k) using your own pre or post-tax dollars)
  • Full Suite of Health and Welfare plans including three medical plan options (including an HSA available option) dental vision life insurance disability EAP and more
  • Access to Flexible Spending Accounts (Medical/Dependent Care)
  • Competitive vacation and sick leave policies
  • Free on-site parking

The above statements describe the level of work performed and expected in general terms. The statements are not intended to list all the responsibilities duties and/or skills required of employees so classified and the content herein is subject to change due to the business needs of Scripps Research with or without notice. Furthermore nothing in this job description shall be interpreted to be in conflict with or to eliminate or modify in any way the employment-at-will status of Scripps Research staff.

EEO Statement:
The Scripps Research Institute is an Equal Opportunity Employer. We promote diversity of thought culture and background in the fields of science. All qualified applicants are encouraged to apply and will receive consideration for employment without regard to race color religion sex sexual orientation gender identity national origin disability protected veteran status or any other legally protected characteristic or status.


Required Experience:

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